Pathway Computation in Models Derived from Bio-Science Text Sources

Troels Andreasen, Henrik Bulskov Styltsvig, Per Anker Jensen, Jørgen Fischer Nilsson

Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningpeer review

Abstract

This paper outlines a system, OntoScape, serving to accomplish complex inference tasks on knowledge bases and bio-models derived from life-science text corpora. The system applies so-called natural logic, a form of logic which is readable for humans. This logic affords ontological representations of complex terms appearing in the text sources. Along with logical propositions, the system applies a semantic graph representation facilitating calculation of bio-pathways. More generally, the system affords means of query answering appealing to general and domain specific inference rules.
OriginalsprogEngelsk
TitelFoundations of Intelligent Systems : 23rd International Symposium, ISMIS 2017, Warsaw, Poland, June 26-29, 2017, Proceedings
RedaktørerMarzena Kryszkiewicz, Annalisa Appice, Dominik Ślęzak, Henryk Rybinski, Andrzej Skowron, Zbigniew W. Raś
Udgivelses stedCham
ForlagSpringer
Publikationsdato2017
Sider424-434
ISBN (Trykt)978-3-319-60437-4
ISBN (Elektronisk)978-3-319-60438-1
DOI
StatusUdgivet - 2017
Begivenhed23rd International Symposium on Methodologies for Intelligent Systems: 23rd International Symposium - Warsaw University of Technology, Warsawa, Polen
Varighed: 26 jun. 201729 jun. 2017
Konferencens nummer: 23
http://ismis2017.ii.pw.edu.pl/

Konference

Konference23rd International Symposium on Methodologies for Intelligent Systems
Nummer23
LokationWarsaw University of Technology
LandPolen
ByWarsawa
Periode26/06/201729/06/2017
Internetadresse
NavnLecture Notes in Computer Science
Nummer10352
ISSN0302-9743
NavnLecture notes in artificial intelligence
Nummer10352
ISSN0302-9743

Emneord

  • Semantic text processing in bio-informatics
  • Bio-models using natural logic and semantic graphs
  • Querying and pathway computation

Citer dette

Andreasen, T., Styltsvig, H. B., Jensen, P. A., & Nilsson, J. F. (2017). Pathway Computation in Models Derived from Bio-Science Text Sources. I M. Kryszkiewicz, A. Appice, D. Ślęzak, H. Rybinski, A. Skowron, & Z. W. Raś (red.), Foundations of Intelligent Systems : 23rd International Symposium, ISMIS 2017, Warsaw, Poland, June 26-29, 2017, Proceedings (s. 424-434). Springer. Lecture Notes in Computer Science, Nr. 10352, Lecture notes in artificial intelligence, Nr. 10352 https://doi.org/10.1007/978-3-319-60438-1_42