TY - JOUR
T1 - A practical approach to steady-state kinetic analysis of cellulases acting on their natural insoluble substrate
AU - Kari, Jeppe
AU - Christensen, Stefan Jarl
AU - Wienecke Andersen, Morten
AU - Sellés Baiget, Selene
AU - Borch, Kim
AU - Westh, Peter
PY - 2019
Y1 - 2019
N2 - Measurement of steady-state rates (vSS) is straightforward in standard enzymology with soluble substrate, and it has been instrumental for comparative biochemical analyses within this area. For insoluble substrate, however, experimental values of vss remain controversial, and this has strongly limited the amount and quality of comparative analyses for cellulases and other enzymes that act on the surface of an insoluble substrate. In the current work, we have measured progress curves over a wide range of conditions for two cellulases, TrCel6A and TrCel7A from Trichoderma reesei, acting on their natural, insoluble substrate, cellulose. Based on this, we consider practical compromises for the determination of experimental vSS values, and propose a basic protocol that provides representative reaction rates and is experimentally simple so that larger groups of enzymes and conditions can be readily assayed with standard laboratory equipment. We surmise that the suggested experimental approach can be useful in comparative biochemical studies of cellulases; an area that remains poorly developed.
AB - Measurement of steady-state rates (vSS) is straightforward in standard enzymology with soluble substrate, and it has been instrumental for comparative biochemical analyses within this area. For insoluble substrate, however, experimental values of vss remain controversial, and this has strongly limited the amount and quality of comparative analyses for cellulases and other enzymes that act on the surface of an insoluble substrate. In the current work, we have measured progress curves over a wide range of conditions for two cellulases, TrCel6A and TrCel7A from Trichoderma reesei, acting on their natural, insoluble substrate, cellulose. Based on this, we consider practical compromises for the determination of experimental vSS values, and propose a basic protocol that provides representative reaction rates and is experimentally simple so that larger groups of enzymes and conditions can be readily assayed with standard laboratory equipment. We surmise that the suggested experimental approach can be useful in comparative biochemical studies of cellulases; an area that remains poorly developed.
KW - Cellobiohydrolase
KW - Heterogeneous enzyme catalysis
KW - Initial rate measurements
KW - Interfacial enzyme reaction
KW - Inverse Michaelis Menten equation
KW - Steady state kinetics
U2 - 10.1016/j.ab.2019.113411
DO - 10.1016/j.ab.2019.113411
M3 - Journal article
SN - 0003-2697
VL - 586
JO - Analytical Biochemistry
JF - Analytical Biochemistry
IS - 586
M1 - 113411
ER -